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	<title>Smithsonian Science &#187; Tropical Research Institute</title>
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	<link>http://smithsonianscience.org</link>
	<description>A Web site featuring highlights of the Smithsonian Institution’s scientific research in the fields of anthropology, astrophysics, conservation biology, geology, materials science, paleontology and zoology</description>
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		<title>Video: Meet our Scientist&#8211;Mark Torchin tracks invasive marine species and their parasites in Panama</title>
		<link>http://smithsonianscience.org/2012/02/video-meet-our-scientist-mark-torchin-tracks-invasive-marine-species-and-their-parasites-in-panama/</link>
		<comments>http://smithsonianscience.org/2012/02/video-meet-our-scientist-mark-torchin-tracks-invasive-marine-species-and-their-parasites-in-panama/#comments</comments>
		<pubDate>Thu, 02 Feb 2012 14:03:02 +0000</pubDate>
		<dc:creator>John Barrat</dc:creator>
				<category><![CDATA[Video]]></category>
		<category><![CDATA[biodiversity]]></category>
		<category><![CDATA[invasive species]]></category>
		<category><![CDATA[Tropical Research Institute]]></category>

		<guid isPermaLink="false">http://smithsonianscience.org/?p=12754</guid>
		<description><![CDATA[Mark Torchin, a marine ecologist at the Smithsonian Tropical Research Institute (STRI) in Panama, talks about how he studies the parasites of invasive marine animals such as snails. Much of his research focuses on biological invasions and the dynamics between the host, the parasites and the surrounding ecosystem.


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<li><a href='http://smithsonianscience.org/2012/01/video-meet-our-scientist-rachel-page-studies-frog-eating-bats-in-panama/' rel='bookmark' title='Permanent Link: VIDEO: Meet our Scientist Rachel Page. She studies frog-eating bats, and other animals, in Panama'>VIDEO: Meet our Scientist Rachel Page. She studies frog-eating bats, and other animals, in Panama</a></li>
<li><a href='http://smithsonianscience.org/2011/08/meet-scientist-meg-crofoot-primate-researcher-at-the-smithsonian-tropical-research-institute/' rel='bookmark' title='Permanent Link: Video: Meet our scientist Meg Crofoot, primate researcher in Panama. Meg studies intergroup competition in white‐faced capuchin monkeys.'>Video: Meet our scientist Meg Crofoot, primate researcher in Panama. Meg studies intergroup competition in white‐faced capuchin monkeys.</a></li>
</ol>]]></description>
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<p>Related posts:<ol><li><a href='http://smithsonianscience.org/2011/06/video-meet-our-scientist-mark-torchin-marine-ecologist-studies-the-parasites-of-invasive-marine-animals-in-panama/' rel='bookmark' title='Permanent Link: Video: Meet our Scientist&#8211;Mark Torchin tracks invasive marine species and their parasites in Panama'>Video: Meet our Scientist&#8211;Mark Torchin tracks invasive marine species and their parasites in Panama</a></li>
<li><a href='http://smithsonianscience.org/2012/01/video-meet-our-scientist-rachel-page-studies-frog-eating-bats-in-panama/' rel='bookmark' title='Permanent Link: VIDEO: Meet our Scientist Rachel Page. She studies frog-eating bats, and other animals, in Panama'>VIDEO: Meet our Scientist Rachel Page. She studies frog-eating bats, and other animals, in Panama</a></li>
<li><a href='http://smithsonianscience.org/2011/08/meet-scientist-meg-crofoot-primate-researcher-at-the-smithsonian-tropical-research-institute/' rel='bookmark' title='Permanent Link: Video: Meet our scientist Meg Crofoot, primate researcher in Panama. Meg studies intergroup competition in white‐faced capuchin monkeys.'>Video: Meet our scientist Meg Crofoot, primate researcher in Panama. Meg studies intergroup competition in white‐faced capuchin monkeys.</a></li>
</ol></p>]]></content:encoded>
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		<title>Ancient popcorn discovered in Peru</title>
		<link>http://smithsonianscience.org/2012/01/ancient-popcorn-discovered-in-peru/</link>
		<comments>http://smithsonianscience.org/2012/01/ancient-popcorn-discovered-in-peru/#comments</comments>
		<pubDate>Wed, 18 Jan 2012 13:06:35 +0000</pubDate>
		<dc:creator>John Barrat</dc:creator>
				<category><![CDATA[anthropology]]></category>
		<category><![CDATA[botany]]></category>
		<category><![CDATA[National Museum of Natural History]]></category>
		<category><![CDATA[paleontology]]></category>
		<category><![CDATA[Tropical Research Institute]]></category>

		<guid isPermaLink="false">http://smithsonianscience.org/?p=17343</guid>
		<description><![CDATA[People living along the coast of Peru were eating popcorn 2,000 years earlier than previously reported and before ceramic pottery was used there, according to a new paper in the Proceedings of the National Academy of Sciences.


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</ol>]]></description>
			<content:encoded><![CDATA[<p>People living along the coast of Peru were eating popcorn 2,000 years earlier than previously reported and before ceramic pottery was used there, according to a new paper in the Proceedings of the National Academy of Sciences co-authored by Dolores Piperno, curator of New World archaeology at the Smithsonian’s National Museum of Natural History and emeritus staff scientist at the Smithsonian Tropical Research Institute.<a href="http://smithsonianscience.org/wordpress/wp-content/uploads/2012/01/Peruvian-corn-cobs.jpg"><img class="size-medium wp-image-17369 alignright" style="margin: 15px;" title="Peruvian-corn-cobs" src="http://smithsonianscience.org/wordpress/wp-content/uploads/2012/01/Peruvian-corn-cobs-300x194.jpg" alt="" width="300" height="194" /></a></p>
<p><em>Image right: These ancient corn cobs date roughly from 6,500-4,000 years ago. A  is Proto-Confite Morocho race; B, Confite Chavinense maize race; and C is  Proto-Alazan maize race.</em><em>. (Photo by Tom Dillehay) </em></p>
<p>Some of the oldest known corncobs, husks, stalks and tassels, dating from 6,700 to 3,000 years ago were found at Paredones and Huaca Prieta, two mound sites on Peru’s arid northern coast. The research group, led by Tom Dillehay from Vanderbilt University and Duccio Bonavia from Peru’s Academia Nacional de la Historia, also found corn microfossils: starch grains and phytoliths. Characteristics of the cobs—the earliest ever discovered in South America—indicate that the sites’ ancient inhabitants ate corn several ways, including popcorn and flour corn. However, corn was still not an important part of their diet.<a href="http://smithsonianscience.org/wordpress/wp-content/uploads/2012/01/Teosinte.png"><img class="alignleft size-medium wp-image-17358" style="margin: 15px;" title="Wild forms of Zea mays are called 'Teosinte'. Image description: Over time, selective breeding modifies teosinte's few fruitcases (left) into modern corn's rows of exposed kernels (right). (Photo courtesy of John Doebley.)." src="http://smithsonianscience.org/wordpress/wp-content/uploads/2012/01/Teosinte-199x300.png" alt="Wild forms of Zea mays are called 'Teosinte'. Image description: Over time, selective breeding modifies teosinte's few fruitcases (left) into modern corn's rows of exposed kernels (right). (Photo courtesy of John Doebley.)." width="199" height="300" /></a></p>
<p><em>Image left: Wild forms of</em> Zea mays<em> are called  &#8216;teosinte&#8217;.  Over time, selective breeding modifies teosinte&#8217;s few  fruitcases (left)  into modern corn&#8217;s rows of exposed kernels (right).  (Photo courtesy John Doebley.).</em></p>
<p>“Corn was first domesticated in Mexico nearly 9,000 years ago from a wild grass called teosinte,” Piperno says. “Our results show that only a few thousand years later corn arrived in South America where its evolution into different varieties that are now common in the Andean region began. This evidence further indicates that in many areas corn arrived before pots did and that early experimentation with corn as a food was not dependent on the presence of pottery.”</p>
<p>Understanding the subtle transformations in the characteristics of cobs and kernels that led to the hundreds of maize races known today, as well as where and when each of them developed, is a challenge. Corncobs and kernels were not well preserved in the humid tropical forests between Central and South America, including Panama—the primary dispersal routes for the crop after it first left Mexico about 8,000 years ago.</p>
<p>“These new and unique races of corn may have developed quickly in South America, where there was no chance that they would continue to be pollinated by wild teosinte,” Piperno says.  “Because there is so little data available from other places for this time period, the wealth of morphological information about the cobs and other corn remains at this early date is very important for understanding how corn became the crop we know today.”</p>
<p>&#8220;Preceramic corn from Pardones and Huaca Prieta, Peru,&#8221; Grobman, A., Bonavia, D., Dillehay, T.D., Piperno, D.R., Iriarte, J., Holst, I. 2012. . PNAS early online edition, week of Jan. 16, 2012.</p>


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<li><a href='http://smithsonianscience.org/2011/01/starch-grains-found-on-neandertal-teeth-helps-debunk-theory-their-extinction-was-caused-by-dietary-deficiencies/' rel='bookmark' title='Permanent Link: Starch grains found on Neandertal teeth debunks theory that dietary deficiencies caused their extinction'>Starch grains found on Neandertal teeth debunks theory that dietary deficiencies caused their extinction</a></li>
</ol></p>]]></content:encoded>
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		<title>VIDEO: Meet our Scientist Rachel Page. She studies frog-eating bats, and other animals, in Panama</title>
		<link>http://smithsonianscience.org/2012/01/video-meet-our-scientist-rachel-page-studies-frog-eating-bats-in-panama/</link>
		<comments>http://smithsonianscience.org/2012/01/video-meet-our-scientist-rachel-page-studies-frog-eating-bats-in-panama/#comments</comments>
		<pubDate>Mon, 09 Jan 2012 18:33:40 +0000</pubDate>
		<dc:creator>John Barrat</dc:creator>
				<category><![CDATA[Meet Our Scientists]]></category>
		<category><![CDATA[Video]]></category>
		<category><![CDATA[conservation biology]]></category>
		<category><![CDATA[zoology]]></category>
		<category><![CDATA[amphibian]]></category>
		<category><![CDATA[bats]]></category>
		<category><![CDATA[conservation]]></category>
		<category><![CDATA[ecology]]></category>
		<category><![CDATA[mammals]]></category>
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		<guid isPermaLink="false">http://smithsonianscience.org/?p=17119</guid>
		<description><![CDATA[Meet Rachel Page, a Smithsonian scientist in Panama who studies frog-eating bats (fringe-lipped bats), among other topics. Her current research focuses on learning and memory in neotropical bats, combining field studies with laboratory experiments to learn about predator cognition and its effects on the evolution of their prey.


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</ol>]]></description>
			<content:encoded><![CDATA[<p><object classid="clsid:d27cdb6e-ae6d-11cf-96b8-444553540000" width="260" height="210" codebase="http://download.macromedia.com/pub/shockwave/cabs/flash/swflash.cab#version=6,0,40,0"><param name="allowFullScreen" value="true" /><param name="allowscriptaccess" value="always" /><param name="src" value="http://www.youtube.com/v/4SW-2TYX8Sg?version=3&amp;hl=en_US" /><param name="allowfullscreen" value="true" /><embed type="application/x-shockwave-flash" width="260" height="310" src="http://www.youtube.com/v/4SW-2TYX8Sg?version=3&amp;hl=en_US" allowscriptaccess="always" allowfullscreen="true"></embed></object></p>


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</ol></p>]]></content:encoded>
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		<title>Members of small monkey groups more likely to fight, researchers find</title>
		<link>http://smithsonianscience.org/2011/12/members-of-small-monkey-groups-more-likely-to-fight/</link>
		<comments>http://smithsonianscience.org/2011/12/members-of-small-monkey-groups-more-likely-to-fight/#comments</comments>
		<pubDate>Wed, 28 Dec 2011 03:13:54 +0000</pubDate>
		<dc:creator>John Barrat</dc:creator>
				<category><![CDATA[anthropology]]></category>
		<category><![CDATA[zoology]]></category>
		<category><![CDATA[mammals]]></category>
		<category><![CDATA[Tropical Research Institute]]></category>

		<guid isPermaLink="false">http://smithsonianscience.org/?p=16928</guid>
		<description><![CDATA[Small monkey groups may win territorial disputes against larger groups because some members of the larger, invading groups avoid aggressive encounters.


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</ol>]]></description>
			<content:encoded><![CDATA[<p><img class="alignleft size-medium wp-image-16932" style="margin: 15px;" title="39400_web" src="http://smithsonianscience.org/wordpress/wp-content/uploads/2011/12/39400_web-300x199.jpg" alt="" width="300" height="199" /></p>
<p><span style="font-weight: normal;">Small monkey groups may win territorial disputes against larger groups because some members of the larger, invading groups avoid aggressive encounters. In a new report published in <em>Proceedings of the National Academy of Sciences</em>, Margaret Crofoot and Ian Gilby of the Smithsonian Tropical Research Institute in Panama and the Max Planck Institute of Ornithology show that individual monkeys that don&#8217;t participate in conflicts prevent large groups from achieving their competitive potential.</span></p>
<p><em>Image above: Is this monkey a wimp? A new study by Margaret Crofoot and Ian Gilby carried out at a research station run by the Smithsonian on an island in the Panama Canal shows that the answer may depend on the size of the group it belongs to. (Photo by Marcos Guerra)</em></p>
<p><em> </em>The authors used recorded vocalizations to simulate territorial invasions into the ranges of wild white-faced capuchin monkey groups at the Smithsonian reasearch station on Barro Colorado Island in Panama. Monkeys responded more vigorously to territorial challenges near the center of their territories and were more likely to flee in encounters near the borders.</p>
<p><object classid="clsid:d27cdb6e-ae6d-11cf-96b8-444553540000" width="464" height="292" codebase="http://download.macromedia.com/pub/shockwave/cabs/flash/swflash.cab#version=6,0,40,0"><param name="allowFullScreen" value="true" /><param name="allowscriptaccess" value="always" /><param name="src" value="http://www.youtube.com/v/b-6PkZn7EPw?version=3&amp;hl=en_US&amp;rel=0" /><param name="allowfullscreen" value="true" /><embed type="application/x-shockwave-flash" width="464" height="292" src="http://www.youtube.com/v/b-6PkZn7EPw?version=3&amp;hl=en_US&amp;rel=0" allowscriptaccess="always" allowfullscreen="true"></embed></object></p>
<p>Defection by members of larger groups was more common than defection by members of smaller groups. Groups that outnumbered their opponents could convert their numerical superiority to a competitive advantage when defending the center of their own range against neighboring intruders, but failed to do so when they attempted to invade the ranges of their neighbors, because more individuals in large groups chose not to participate. According to the authors, these behavior patterns even the balance of power among groups and create a &#8216;home-field advantage&#8217; which may explain how large and small groups are able to coexist.</p>


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</ol></p>]]></content:encoded>
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		<title>Reptiles may be spreading deadly amphibian disease in the tropics</title>
		<link>http://smithsonianscience.org/2011/12/reptiles-may-be-spreading-deadly-ampibian-diesase-in-the-tropics/</link>
		<comments>http://smithsonianscience.org/2011/12/reptiles-may-be-spreading-deadly-ampibian-diesase-in-the-tropics/#comments</comments>
		<pubDate>Wed, 14 Dec 2011 20:24:30 +0000</pubDate>
		<dc:creator>John Barrat</dc:creator>
				<category><![CDATA[conservation biology]]></category>
		<category><![CDATA[zoology]]></category>
		<category><![CDATA[amphibian]]></category>
		<category><![CDATA[chytrid fungus]]></category>
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		<description><![CDATA[Reptiles that live near and feed upon amphibians in the tropics may be spreading the deadly amphibian disease Chytridiomycosis  (caused by the chytrid fungus Batrachochytrium dedrobatidis), holding and transporting reservoirs of the fungus on their skin.


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<li><a href='http://smithsonianscience.org/2010/04/shipping-industry-sends-help-as-project-in-panama-tackles-amphibian-crisis/' rel='bookmark' title='Permanent Link: Shipping industry sends help as project in Panama tackles amphibian crisis'>Shipping industry sends help as project in Panama tackles amphibian crisis</a></li>
</ol>]]></description>
			<content:encoded><![CDATA[<p><a href="http://smithsonianscience.org/wordpress/wp-content/uploads/2011/12/Female_common_basilisk_Costa_Rica.jpg"><img class="size-medium wp-image-16751 alignright" style="margin: 15px;" title="Female_common_basilisk,_Costa_Rica" src="http://smithsonianscience.org/wordpress/wp-content/uploads/2011/12/Female_common_basilisk_Costa_Rica-219x300.jpg" alt="" width="219" height="300" /></a>Reptiles that live near and feed upon amphibians in the tropics may be spreading the deadly amphibian disease Chytridiomycosis  (caused by the chytrid fungus <em>Batrachochytrium dedrobatidis)</em>, holding and transporting reservoirs of the fungus on their skin, say researchers from the Smithsonian Tropical Research Institute and Canada&#8217;s McGill University. In fact, chytridiomycosis may not be strictly a disease of amphibians, as many believe. It also may be killing reptiles and be partially responsible for the noticed decline in reptile populations around the world.</p>
<p><em>Image right: </em><em>Common basilisk lizard female</em>, Basiliscus basiliscus.<em> (Photo by Steven Johnson) </em></p>
<p>In a study recently published in the journal Diseases of Aquatic Organisms, scientists took skin swabs from individuals of 13 different species of lizards and 8 different species of snakes caught in western and central Panama. DNA analysis of the swabs revealed that 16 percent of the lizards and 38 percent of the snakes carried the chytrid fungus on their skin. None of the reptiles that tested positive for the disease showed signs of infection or sickness comparable to what is observed in amphibians stricken with the disease.<a href="http://smithsonianscience.org/wordpress/wp-content/uploads/2011/12/29735_orig.jpg"><img class="alignleft size-medium wp-image-16750" style="margin: 15px;" title="29735_orig" src="http://smithsonianscience.org/wordpress/wp-content/uploads/2011/12/29735_orig-300x224.jpg" alt="" width="300" height="224" /></a></p>
<p><em>Image left: The anolis lizard </em>Anolis humilis.<em> (Photo by Shawn Mallan)</em></p>
<p>“Lizards and snakes will harbor <em>Batrachochytrium dedrobatidis</em> at non-pathological levels,” the researchers write, and infection in reptiles is highly plausible. “By potentially maintaining the pathogen in the environment without succumbing to the disease, these reptiles may be important vectors or reservoir hosts for <em>Batrachochytrium dedrobatidis</em>… and may allow virulent strains of it to spread.”</p>
<p>While the study presents no evidence that chytridiomycosis is lethal to reptiles, its presence on the skin of reptiles in areas that have witnessed the decline of both amphibians and reptiles in recent years is cause for concern, the scientists say.<a href="http://smithsonianscience.org/wordpress/wp-content/uploads/2011/12/800px-Imantodes_cenchoa_Yasuni.jpg"><img class="size-medium wp-image-16749 alignright" style="margin: 15px;" title="800px-Imantodes_cenchoa_(Yasuni)" src="http://smithsonianscience.org/wordpress/wp-content/uploads/2011/12/800px-Imantodes_cenchoa_Yasuni-300x199.jpg" alt="" width="300" height="199" /></a></p>
<p><em>Image right: The tropical snake </em>Imantodes cenchoa. <em>(Photo by Geoff Gallice)</em></p>
<p>“<a href="http://www.int-res.com/abstracts/dao/v97/n2/p127-134/">Reptiles as potential vectors and hosts of the amphibian pathogen <em>Batrachochytrium dendrobatidis</em> in Panama</a>,” by Vanessa Kilburn and David Green of McGill University and Roberto Ibanez of the Smithsonian Tropical Research Institute, was published in December in the journal Diseases of Aquatic Organisms.</p>


<p>Related posts:<ol><li><a href='http://smithsonianscience.org/2011/06/deadly-amphibian-disease-detected-in-the-last-disease-free-region-of-central-america/' rel='bookmark' title='Permanent Link: Deadly amphibian disease detected in the last disease-free region of Central America'>Deadly amphibian disease detected in the last disease-free region of Central America</a></li>
<li><a href='http://smithsonianscience.org/2011/11/research-team-to-explore-how-microbial-diversity-defends-against-disease/' rel='bookmark' title='Permanent Link: Research team to explore how microbial diversity defends against disease'>Research team to explore how microbial diversity defends against disease</a></li>
<li><a href='http://smithsonianscience.org/2010/04/shipping-industry-sends-help-as-project-in-panama-tackles-amphibian-crisis/' rel='bookmark' title='Permanent Link: Shipping industry sends help as project in Panama tackles amphibian crisis'>Shipping industry sends help as project in Panama tackles amphibian crisis</a></li>
</ol></p>]]></content:encoded>
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		<title>Meet Our Scientist: Justin Touchon, Frog Follower at the Smithsonian Tropical Research Institute in Panama</title>
		<link>http://smithsonianscience.org/2011/11/meet-our-scientist-justin-touchon-frog-follower-at-the-smithsonian-tropical-research-institute-in-panama/</link>
		<comments>http://smithsonianscience.org/2011/11/meet-our-scientist-justin-touchon-frog-follower-at-the-smithsonian-tropical-research-institute-in-panama/#comments</comments>
		<pubDate>Fri, 18 Nov 2011 13:52:07 +0000</pubDate>
		<dc:creator>John Barrat</dc:creator>
				<category><![CDATA[Video]]></category>
		<category><![CDATA[conservation biology]]></category>
		<category><![CDATA[zoology]]></category>
		<category><![CDATA[amphibian]]></category>
		<category><![CDATA[Tropical Research Institute]]></category>

		<guid isPermaLink="false">http://smithsonianscience.org/?p=16165</guid>
		<description><![CDATA[Meet Smithsonian scientist Justin Touchon, a National Science Foundation (NSF) postdoctoral researcher at the Smithsonian Tropical Research Institute in Panama.

Justin's work focuses on developmental ecology and reproductive plasticity of the hourglass treefrog (Dendropsophus ebraccatus) and red-eyed treefrog (Agalychnis callidryas). Justin and his advisor, Karen Warkentin, were the first to have witnessed the frogs laying eggs in water, in addition to doing so on land -- something with major implications for the evolutionary biology of similar creatures.


Related posts:<ol><li><a href='http://smithsonianscience.org/2012/01/video-meet-our-scientist-rachel-page-studies-frog-eating-bats-in-panama/' rel='bookmark' title='Permanent Link: VIDEO: Meet our Scientist Rachel Page. She studies frog-eating bats, and other animals, in Panama'>VIDEO: Meet our Scientist Rachel Page. She studies frog-eating bats, and other animals, in Panama</a></li>
<li><a href='http://smithsonianscience.org/2011/04/tropical-research-institute-entomologist-david-roubik-talks-about-his-life-as-a-scientist-based-in-panama/' rel='bookmark' title='Permanent Link: Tropical Research Institute entomologist David Roubik talks about his life as a scientist based in Panama'>Tropical Research Institute entomologist David Roubik talks about his life as a scientist based in Panama</a></li>
<li><a href='http://smithsonianscience.org/2011/04/invasive-lionfish-under-scrutiny-by-smithsonian-tropical-research-institute-intern/' rel='bookmark' title='Permanent Link: Invasive Caribbean lionfish under scrutiny by Smithsonian Tropical Research Institute intern'>Invasive Caribbean lionfish under scrutiny by Smithsonian Tropical Research Institute intern</a></li>
</ol>]]></description>
			<content:encoded><![CDATA[<p><object width="260" height="215"><param name="movie" value="http://www.youtube.com/v/hKlrvYFjouU?version=3&amp;hl=en_US"></param><param name="allowFullScreen" value="true"></param><param name="allowscriptaccess" value="always"></param><embed src="http://www.youtube.com/v/hKlrvYFjouU?version=3&amp;hl=en_US" type="application/x-shockwave-flash" width="260" height="215" allowscriptaccess="always" allowfullscreen="true"></embed></object></p>


<p>Related posts:<ol><li><a href='http://smithsonianscience.org/2012/01/video-meet-our-scientist-rachel-page-studies-frog-eating-bats-in-panama/' rel='bookmark' title='Permanent Link: VIDEO: Meet our Scientist Rachel Page. She studies frog-eating bats, and other animals, in Panama'>VIDEO: Meet our Scientist Rachel Page. She studies frog-eating bats, and other animals, in Panama</a></li>
<li><a href='http://smithsonianscience.org/2011/04/tropical-research-institute-entomologist-david-roubik-talks-about-his-life-as-a-scientist-based-in-panama/' rel='bookmark' title='Permanent Link: Tropical Research Institute entomologist David Roubik talks about his life as a scientist based in Panama'>Tropical Research Institute entomologist David Roubik talks about his life as a scientist based in Panama</a></li>
<li><a href='http://smithsonianscience.org/2011/04/invasive-lionfish-under-scrutiny-by-smithsonian-tropical-research-institute-intern/' rel='bookmark' title='Permanent Link: Invasive Caribbean lionfish under scrutiny by Smithsonian Tropical Research Institute intern'>Invasive Caribbean lionfish under scrutiny by Smithsonian Tropical Research Institute intern</a></li>
</ol></p>]]></content:encoded>
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		<title>Research team to explore how microbial diversity defends against disease</title>
		<link>http://smithsonianscience.org/2011/11/research-team-to-explore-how-microbial-diversity-defends-against-disease/</link>
		<comments>http://smithsonianscience.org/2011/11/research-team-to-explore-how-microbial-diversity-defends-against-disease/#comments</comments>
		<pubDate>Tue, 08 Nov 2011 17:24:12 +0000</pubDate>
		<dc:creator>John Barrat</dc:creator>
				<category><![CDATA[conservation biology]]></category>
		<category><![CDATA[zoology]]></category>
		<category><![CDATA[amphibian]]></category>
		<category><![CDATA[chytrid fungus]]></category>
		<category><![CDATA[National Zoo]]></category>
		<category><![CDATA[Smithsonian Conservation Biology Institute]]></category>
		<category><![CDATA[tropical frogs]]></category>
		<category><![CDATA[Tropical Research Institute]]></category>

		<guid isPermaLink="false">http://smithsonianscience.org/?p=16051</guid>
		<description><![CDATA[Researchers who will study the microbial communities living on the skins of frogs that are surviving the fungal scourge of chytridiomycosis, deadly to the frogs.


Related posts:<ol><li><a href='http://smithsonianscience.org/2011/06/deadly-amphibian-disease-detected-in-the-last-disease-free-region-of-central-america/' rel='bookmark' title='Permanent Link: Deadly amphibian disease detected in the last disease-free region of Central America'>Deadly amphibian disease detected in the last disease-free region of Central America</a></li>
<li><a href='http://smithsonianscience.org/2011/12/reptiles-may-be-spreading-deadly-ampibian-diesase-in-the-tropics/' rel='bookmark' title='Permanent Link: Reptiles may be spreading deadly amphibian disease in the tropics'>Reptiles may be spreading deadly amphibian disease in the tropics</a></li>
<li><a href='http://smithsonianscience.org/2010/07/new-frog-species-pose-challenge-for-conservation-project-in-panama/' rel='bookmark' title='Permanent Link: New frog species pose challenge for conservation project in Panama'>New frog species pose challenge for conservation project in Panama</a></li>
</ol>]]></description>
			<content:encoded><![CDATA[<p>Amphibians are among the most threatened creatures on earth, with  some 40 percent of amphibian species threatened or endangered. One of  their primary threats is a rapidly spreading disease that attacks the  skin cells of amphibians.  &#8220;Chytridiomycosis, a fungal disease, has been  a key factor in the extinctions of many species of frogs around the  world,&#8221; says Lisa Belden, associate professor of biological sciences in  the College of Science at Virginia Tech.<a href="http://smithsonianscience.org/wordpress/wp-content/uploads/2011/11/37813_web.jpg"><img class="size-medium wp-image-16056 alignright" style="margin: 15px;" title="37813_web" src="http://smithsonianscience.org/wordpress/wp-content/uploads/2011/11/37813_web-300x199.jpg" alt="" width="300" height="199" /></a></p>
<p><em>Image right: The Red-eyed treefrog </em>(Agalychnis callidryas)<em> is one of the species the team will be examining in Panama. (Photo by Brian Gratwicke)</em></p>
<p>Belden is leading a team of researchers who  will study the microbial communities living on the skins of frogs that  are surviving the fungal scourge. The effort is one of 11 new Dimensions  of Biodiversity projects funded by the National Science Foundation with the aim of transforming, by 2020, how scientists describe  and understand the scope and role of life on earth. Additional members of the $2 million research project are  Virginia  Tech&#8217;s Leanna House, assistant professor of  statistics, and  Roderick Jensen, professor of biological sciences; Brian Gratwicke,  a research biologist at the Smithsonian Conservation  Biology Institute,  and Roberto Ibáñez, a scientist at the Smithsonian  Tropical Research  Institute in Panama; Reid  Harris,  professor of biology at James Madison University; and Kevin  Minbiole,  assistant professor of organic and natural products chemistry  at  Villanova University;</p>
<p>The goals of the research team will be achieved through hands on  work in Panama, where the spread of chytrid fungus has been extensively  documented.  Researchers will swab the skin of frogs in areas with and  without chytrid to collect samples of the microbes that live there. They  will then release the frogs and assess the microbial community, both in  terms of what microbes are there and what they are doing functionally  on the frogs&#8217; skin.  To see what microbes are there, researchers will examine  the microbe DNA.  To see what the microbes are doing, researchers will examine  how well they inhibit the growth of the chytrid fungus, and also assess  what chemical metabolites are being produced by the microbes.</p>
<p>As leaders of the Panama Amphibian Rescue and Conservation  Project the  Smithsonian&#8217;s Brian Gratwicke and Roberto Ibáñez are maintaining captive  colonies of endangered Panamanian  frogs that are highly susceptible to  the chytrid fungus. The hope is  that the use of probiotics will  someday allow release some of these  species back into nature.</p>
<p>The research team is interested in whether microbial communities on the  skin of frogs have a role in disease resistance, in particular to the  devastating chytrid fungus. And if there is such immunity, does it rely  on the same mechanism from one frog to another, on different species of  frogs, and in different locations?</p>
<p>&#8220;Our long-term goal is to try to develop probiotics&#8221; – to share the  biochemistry employed by beneficial microbes with frogs who need it,&#8221; Belden  said.&#8211;<em>Source: Virginia Tech<br />
</em></p>


<p>Related posts:<ol><li><a href='http://smithsonianscience.org/2011/06/deadly-amphibian-disease-detected-in-the-last-disease-free-region-of-central-america/' rel='bookmark' title='Permanent Link: Deadly amphibian disease detected in the last disease-free region of Central America'>Deadly amphibian disease detected in the last disease-free region of Central America</a></li>
<li><a href='http://smithsonianscience.org/2011/12/reptiles-may-be-spreading-deadly-ampibian-diesase-in-the-tropics/' rel='bookmark' title='Permanent Link: Reptiles may be spreading deadly amphibian disease in the tropics'>Reptiles may be spreading deadly amphibian disease in the tropics</a></li>
<li><a href='http://smithsonianscience.org/2010/07/new-frog-species-pose-challenge-for-conservation-project-in-panama/' rel='bookmark' title='Permanent Link: New frog species pose challenge for conservation project in Panama'>New frog species pose challenge for conservation project in Panama</a></li>
</ol></p>]]></content:encoded>
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		<title>Air pollution is fertilizing tropical forests</title>
		<link>http://smithsonianscience.org/2011/11/air-pollution-is-fertilizing-tropical-forests/</link>
		<comments>http://smithsonianscience.org/2011/11/air-pollution-is-fertilizing-tropical-forests/#comments</comments>
		<pubDate>Mon, 07 Nov 2011 13:49:30 +0000</pubDate>
		<dc:creator>John Barrat</dc:creator>
				<category><![CDATA[Featured]]></category>
		<category><![CDATA[conservation biology]]></category>
		<category><![CDATA[zoology]]></category>
		<category><![CDATA[air pollution]]></category>
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		<category><![CDATA[botany]]></category>
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		<guid isPermaLink="false">http://smithsonianscience.org/?p=16005</guid>
		<description><![CDATA[Studies at two remote Smithsonian Institution Global Earth Observatory sites in Panama and Thailand show the first evidence of long-term effects of nitrogen pollution in tropical trees.


Related posts:<ol><li><a href='http://smithsonianscience.org/2010/11/plant-diversity-in-tropical-forests-increased-during-ancient-global-warming-event/' rel='bookmark' title='Permanent Link: Plant diversity in tropical forests increased during ancient global warming event'>Plant diversity in tropical forests increased during ancient global warming event</a></li>
<li><a href='http://smithsonianscience.org/2011/08/increased-tropical-forest-growth-could-release-carbon-from-the-soil/' rel='bookmark' title='Permanent Link: Increased tropical forest growth may result in release of stored carbon in the soil'>Increased tropical forest growth may result in release of stored carbon in the soil</a></li>
<li><a href='http://smithsonianscience.org/2010/11/center-for-tropical-forest-science-receives-grant-to-study-diversity-of-tree-communities/' rel='bookmark' title='Permanent Link: Center for Tropical Forest Science receives grant to study diversity of tree communities'>Center for Tropical Forest Science receives grant to study diversity of tree communities</a></li>
</ol>]]></description>
			<content:encoded><![CDATA[<p>Scientists braved ticks and a tiger to discover how human activities have perturbed the nitrogen cycle in tropical forests. Studies at two remote Smithsonian Institution Global Earth Observatory sites in Panama and Thailand show the first evidence of long-term effects of nitrogen pollution in tropical trees.<a href="http://smithsonianscience.org/wordpress/wp-content/uploads/2011/11/SNB_4989.jpg"><img class="size-medium wp-image-16031 alignright" style="margin: 15px;" title="Even remote tropical forests, like this forest in Panama, are affected by nitrogen pollution.  Credit: Marcos Guerra, STRI" src="http://smithsonianscience.org/wordpress/wp-content/uploads/2011/11/SNB_4989-199x300.jpg" alt="" width="199" height="300" /></a></p>
<p><em>Image right: The Smithsonian&#8217;s Barro Colorado Island was the site of the first  large-scale, long-term forest dyanmics plots.  Now there are 42 forest  dynamics plots worldwide that use the same methodology, the Smithsonian  Institution Global Earth Observatory system managed by the Center for  Tropical Forest Science. (Photo by Marcos Guerra)</em></p>
<p>“Air pollution is fertilizing tropical forests with one of the most important nutrients for growth,” said S. Joseph Wright, staff scientist at the Smithsonian Tropical Research Institute in Panama. “We compared nitrogen in leaves from dried specimens collected in 1968 with nitrogen in samples of new leaves collected in 2007. Leaf nitrogen concentration and the proportion of heavy to light nitrogen isotopes increased in the last 40 years, just as they did in another experiment when we applied fertilizer to the forest floor.”</p>
<p>Nitrogen is an element created in stars under high temperatures and pressures. Under normal conditions, it is a colorless, odorless gas that does not readily react with other substances. Air consists of more than 75% nitrogen. But nitrogen also plays a big role in life as an essential component of proteins. When nitrogen gas is zapped by lightning, or absorbed by soil bacteria called “nitrogen fixers,” it is converted into other “active” forms that can be used by animals and plants. Humans fix nitrogen by the Haber process, which converts nitrogen gas into ammonia—now a principal ingredient in fertilizers. Today, nitrogen fixation by humans has approximately doubled the amount of reactive nitrogen emitted.</p>
<p><a href="http://smithsonianscience.org/wordpress/wp-content/uploads/2011/11/37516_web.jpg"><img class="alignleft size-medium wp-image-16033" style="margin: 15px;" title="37516_web" src="http://smithsonianscience.org/wordpress/wp-content/uploads/2011/11/37516_web-300x200.jpg" alt="" width="300" height="200" /></a></p>
<p><em>Image left: The Smithsonian&#8217;s Barro Colorado Island was the site of the first  large-scale, long-term forest dyanmics plots.  Now there are 42 forest  dynamics plots worldwide that use the same methodology, the Smithsonian  Institution Global Earth Observatory system managed by the Center for  Tropical Forest Science. (Photo by Marcos Guerra)</em></p>
<p>Nitrogen comes in two forms or isotopes: atoms that have the same number of protons but different numbers of neutrons. In the case of nitrogen, the isotopes are <sup>14</sup>N and <sup>15</sup>N, although only about one in 300 nitrogen atoms is the heavier form. Imagine nitrogen in the ecosystem like a bowl of popcorn. Normally the ratio of popped (light) to unpopped (heavy) kernels stays the same, but when someone starts to eat the popcorn, the lighter, popped kernels get used up first, increasing the ratio of heavy to light kernels (or <sup>15</sup>N/<sup>14</sup>N in the case of the ecosystem). Light nitrogen is lost through nitrate leaching and as gases such as N2, and various forms of nitrous oxides or “noxides,” some of which can be important greenhouse gases. In the fertilization study in Panama, mentioned earlier, N<sub>2</sub>O emissions were tripled.</p>
<p>“Tree rings provide a handy timeline for measuring changes in wood nitrogen content,” said Peter Hietz from the Institute of Botany at the University of Natural Resources and Life Sciences in Vienna, who faced down a tiger when sampling trees in a monsoon forest on the Thailand-Myanmar border. “We find that over the last century, there’s an increase in the heavier form of nitrogen over the lighter form, which tells us that there is more nitrogen going into this system and higher losses. We also got the same result in an earlier study of tree rings in Brazilian rainforests, so it looks like nitrogen fixed by humans now affects some of the most remote areas in the world.”</p>
<p>“The results have a number of important implications,” said Ben Turner, staff scientist at STRI. “The most obvious is for trees in the bean family (Fabaceae), a major group in tropical forests that fix their own nitrogen in association with soil bacteria. Increased nitrogen from outside could take away their competitive advantage and make them less common, changing the composition of tree communities.”</p>
<p>“There are also implications for global change models, which are beginning to include nitrogen availability as a factor affecting the response of plants to increasing atmospheric carbon dioxide concentrations,” said Turner. “Most models assume that higher nitrogen equals more plant growth, which would remove carbon from the atmosphere and offset future warming. However a challenge for the models is that there is no evidence that trees are growing faster in Panama, despite the long-term increases in nitrogen deposition and atmospheric carbon dioxide.”</p>
<p>Decades of atmospheric nitrogen deposition have caused major changes in the plants and soils of temperate forests in the U.S. and Europe. Whether tropical forests will face similar consequences is an important question for future research.</p>
<p>The Smithsonian Tropical Research Institute, headquartered in Panama City, Panama, is a unit of the Smithsonian Institution. The Institute furthers the understanding of tropical nature and its importance to human welfare, trains students to conduct research in the tropics and promotes conservation by increasing public awareness of the beauty and importance of tropical ecosystems. Website: <a href="http://www.stri.org/">www.stri.org</a>.</p>


<p>Related posts:<ol><li><a href='http://smithsonianscience.org/2010/11/plant-diversity-in-tropical-forests-increased-during-ancient-global-warming-event/' rel='bookmark' title='Permanent Link: Plant diversity in tropical forests increased during ancient global warming event'>Plant diversity in tropical forests increased during ancient global warming event</a></li>
<li><a href='http://smithsonianscience.org/2011/08/increased-tropical-forest-growth-could-release-carbon-from-the-soil/' rel='bookmark' title='Permanent Link: Increased tropical forest growth may result in release of stored carbon in the soil'>Increased tropical forest growth may result in release of stored carbon in the soil</a></li>
<li><a href='http://smithsonianscience.org/2010/11/center-for-tropical-forest-science-receives-grant-to-study-diversity-of-tree-communities/' rel='bookmark' title='Permanent Link: Center for Tropical Forest Science receives grant to study diversity of tree communities'>Center for Tropical Forest Science receives grant to study diversity of tree communities</a></li>
</ol></p>]]></content:encoded>
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		<title>Meet Our Scientist: Rachel Collin, an expert in the evolution and development of snails who is working in Panama</title>
		<link>http://smithsonianscience.org/2011/11/meet-our-scientist-rachel-collin-an-expert-in-the-evolution-of-snails-who-is-working-in-panama/</link>
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		<pubDate>Wed, 02 Nov 2011 12:39:17 +0000</pubDate>
		<dc:creator>John Barrat</dc:creator>
				<category><![CDATA[Video]]></category>
		<category><![CDATA[conservation biology]]></category>
		<category><![CDATA[zoology]]></category>
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		<description><![CDATA[Meet Rachel Collin, a staff scientist and director of the Bocas Research Station at the Smithsonian Tropical Research Institute in Panama. Rachel studies the evolution of marine gastropods (snails) and oversees multiple disciplines of marine biology at the Collin Lab in Bocas del Toro.


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		<title>Tree dwelling animals were first to fly, study shows</title>
		<link>http://smithsonianscience.org/2011/10/tree-dwelling-animals-were-first-to-fly-study-shows/</link>
		<comments>http://smithsonianscience.org/2011/10/tree-dwelling-animals-were-first-to-fly-study-shows/#comments</comments>
		<pubDate>Tue, 18 Oct 2011 12:38:13 +0000</pubDate>
		<dc:creator>John Barrat</dc:creator>
				<category><![CDATA[conservation biology]]></category>
		<category><![CDATA[zoology]]></category>
		<category><![CDATA[evolution]]></category>
		<category><![CDATA[flight]]></category>
		<category><![CDATA[Tropical Research Institute]]></category>

		<guid isPermaLink="false">http://smithsonianscience.org/?p=15605</guid>
		<description><![CDATA[Adding wings to a robotic bug helped it run faster and better, but was it enough to achieve takeoff?


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			<content:encoded><![CDATA[<p>When engineers at the University of California, Berkeley, outfitted a six-legged robotic bug with wings in an effort to improve its mobility, they unexpectedly shed some light on the evolution of flight.</p>
<p>Adding wings to a robotic bug helped it run faster and better, but was it enough to achieve takeoff?</p>
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<p><em>Video: A six-legged, 25 g robot has been  fitted with flapping wings in order to gain an insight into the  evolution of early birds and insects. Published, 18 October, in IOP Publishing&#8217;s journal Bioinspiration &amp; Biomimetics, the study showed that although flapping wings significantly increased the speed  of running robots, the origin of wings may lie in animals that dwelled  in trees rather than on the ground. &#8220;A wing assisted running robot and implications for avian flight   evolution&#8221; (K Peterson, P Birkmeyer, R Dudley and R S Fearing 2011   Bioinspir. Biomim. 6 046008)</em></p>
<p>Even though the wings significantly improved the running performance of the 10-centimeter-long robot – called DASH, short for Dynamic Autonomous Sprawled Hexapod – they found that the extra boost would not have generated enough speed to launch the critter from the ground. The wing flapping also enhanced the aerial performance of the robot, consistent with the hypothesis that flight originated in gliding tree-dwellers.</p>
<p>The research team, led by Ron Fearing, professor of electrical engineering and head of the <a href="http://robotics.eecs.berkeley.edu/%7Eronf/Biomimetics.html">Biomimetic Millisystems Lab</a> at U.C. Berkeley, <a href="http://iopscience.iop.org/1748-3190/6/4/046008">reports its conclusions online</a> Tuesday, Oct. 18, in the journal <em>Bioinspiration and Biomimetics</em>.</p>
<p>Using robot models could play a useful role in studying the origins of flight, particularly since fossil evidence is so limited, the researchers noted.</p>
<p>First unveiled by Fearing and graduate student Paul Birkmeyer in 2009, DASH is a lightweight, speedy robot made of inexpensive, off-the-shelf materials, including compliant fiber board with legs driven by a battery-powered motor. Its small size makes it a candidate for deployment in areas too cramped or dangerous for humans to enter, such as collapsed buildings.<a href="http://smithsonianscience.org/wordpress/wp-content/uploads/2011/10/roboticbugge.jpg"><img class="size-medium wp-image-15621 alignright" style="margin: 15px;" title="roboticbugge" src="http://smithsonianscience.org/wordpress/wp-content/uploads/2011/10/roboticbugge-300x266.jpg" alt="" width="300" height="266" /></a></p>
<p><em>Image right: DASH+Wings showed the possibility of using robotic   models to provide  insight into biological performance. (Image by Kevin   Peterson,  Biomimetic Millisystems Lab)</em></p>
<p><em></em><strong>A robot gets its wings<br />
</strong><br />
But compared with its biological inspiration, the cockroach, DASH had certain limitations as to where it could scamper. Remaining stable while going over obstacles is fairly tricky for small robots, so the researchers affixed DASH with lateral and tail wings borrowed from a store-bought toy to see if that would help.</p>
<p>The researchers ran tests on four different configurations of the robotic roach, now called DASH+Wings. The test robots included one with a tail only and another that just had the wing’s frames, to determine how the wings impacted locomotion.</p>
<p>With its motorized flapping wings, DASH+Wings’ running speed nearly doubled, going from from 0.68 meters per second with legs alone to 1.29 meters per second. The robot could also take on steeper hills, going from an incline angle of 5.6 degrees to 16.9 degrees.</p>
<p>“With wings, we saw improvements in performance almost immediately,” said study lead author Kevin Peterson, a Ph.D. student in Fearing’s lab. “Not only did the wings make the robot faster and better at steeper inclines, it could now keep itself upright when descending.”</p>
<p>The flapping wings improved the lift-drag ratio, helping DASH+Wings land on its feet instead of just plummeting uncontrolled. Once it hit the ground, the robot was able to continue on its way.</p>
<p><strong>Tree-dwellers vs. ground-runners<br />
</strong><br />
The engineering team’s work caught the attention of animal flight expert Robert Dudley, a UC Berkeley professor of integrative biology and researcher at the Smithsonian’s Tropical Research Institute, who noted that the most dominant theories on flight evolution have been primarily derived from scant fossil records and theoretical modeling.</p>
<p>He referenced previous computer models suggesting that ground-dwellers, given the right conditions, would need only to triple their running speed in order to build up enough thrust for takeoff. The fact that DASH+Wings could maximally muster a doubling of its running speed suggests that wings do not provide enough of a boost to launch an animal from the ground. This finding is consistent with the theory that flight arose from animals that glided downwards from some height.</p>
<p>“The fossil evidence we do have suggests that the precursors to early birds had long feathers on all four limbs, and a long tail similarly endowed with a lot of feathers, which would mechanically be more beneficial for tree-dwelling gliders than for runners on the ground,” Dudley says.</p>
<p>The winged version of DASH is not a perfect model for proto-birds – it has six legs instead of two, and its wings use a sheet of plastic rather than feathers – and thus cannot provide a slam-dunk answer to the question of how flight evolved, Dudley explained.</p>
<p>“What the experiments did do was to demonstrate the feasibility of using robot models to test hypotheses of flight origins,” he said. “It’s the proof of concept that we can actually learn something useful about biological performance through systematic testing of a physical model.”—<em>Source: University of California, Berkeley</em></p>
<p><em><br />
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